PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678425864
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Trihelix
Protein Properties Length: 117aa    MW: 13548.4 Da    PI: 10.0496
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678425864genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.22.8e-105595140
   trihelix  1 rWtkqevlaLiearremeerlrrgk.lkkplWeevskkmre 40
               rW  qe+l L+e+r+++++++r+++ +k+plWeevs+ +++
  678425864 55 RWRTQETLSLLEVRTRLDSKFREANhRKAPLWEEVSRLVKQ 95
               8*********************9643899*******98865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    Send to blast
MEHDYSTAAD PRHYIFTGRS FFQPEFMFDP YPRSIGMPPS CGGSAVEVGD AGIGRWRTQE  60
TLSLLEVRTR LDSKFREANH RKAPLWEEVS RLVKQTLLPF LFSRPVSATR INRKQQF
Cis-element ? help Back to Top
SourceLink
PlantRegMap678425864
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006430288.19e-14trihelix transcription factor PTL
RefseqXP_006481882.19e-14trihelix transcription factor PTL
STRINGXP_006481882.13e-13(Citrus sinensis)
STRINGXP_006430288.13e-13(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1969523
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10000.18e-14Trihelix family protein