PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678430029
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family GeBP
Protein Properties Length: 368aa    MW: 41032.3 Da    PI: 5.4509
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678430029genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573104.67.7e-33154250298
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 fqr+w+ +De v+L+G++++ ++++ +p+ di  f+ef+k++++++v+k+ql +KirrLK+Kf+ +++k  +g++ +fsk+h+q ++elsk+iWg+
  678430029 154 SFQRVWNGDDEEVVLRGILEYSDTKKLDPYTDIASFHEFIKEKLQANVNKDQLRTKIRRLKDKFTLNKNKEVDGEDRVFSKPHEQTAYELSKQIWGK 250
                69*********************************************************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.3E-27155249IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MAKNRAREPD LEPTSDEEES GSESESESES EVESERTPEA APAPSVQQSL PRDHVQSEGS  60
DAGPESEESS DEEAPSPPEP AAIVENATSK KKGNAIVPSQ SSISSEPSTP SSKLIGSKRA  120
ADSKDVSHKD SKKVRRKLDT APESEKRNGS KKPSFQRVWN GDDEEVVLRG ILEYSDTKKL  180
DPYTDIASFH EFIKEKLQAN VNKDQLRTKI RRLKDKFTLN KNKEVDGEDR VFSKPHEQTA  240
YELSKQIWGK TNMETAVRSS ISKLPKQTKP IKENGFLEHS NGVIPENGNV AVKTGADDGP  300
VRKNIPNLSN DSGRSAADME GMVQRIGEWI FEGEKVVEGS KQWKNLKLRE MEAYYQTLQN  360
QHLNRRMS
Cis-element ? help Back to Top
SourceLink
PlantRegMap678430029
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.13e-20DNA-binding storekeeper protein-related transcriptional regulator