PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678431182

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Dof

Protein Properties

Length: 265aa MW: 29327.9 Da PI: 9.3152

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678431182	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.9	2e-37	24	81	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +l+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalr vP+Ggg+rk+kk+ 678431182 24 PSLRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRSVPIGGGCRKSKKM 81 6789***************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-25	23	76	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.0E-32	25	80	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.031	26	80	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	28	64	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence Send to blast
MSTDKGKPEQ QQKKKSAAAR GQEPSLRCPR CDSPNTKFCY YNNYSLSQPR HFCKTCRRYW 60 TKGGALRSVP IGGGCRKSKK MKCSSKEMTG DAGGLRFFQG ISPAMDFQSA SQFGDILNNH 120 LPISATPPPP PPSFSLDPNC AGTSVAFPFK APNLTSFFQE TGGSYRSLAS SIESLSCINQ 180 DLHWRLQQQR LAAPNFIIPS IETTAAGTTA SLQKSQPVLF HGLEISNTKQ QQSDEARNPT 240 EWFFDNSYAT TPTNWSNIQS WNDFS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678431182

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016734926.1	1e-78	PREDICTED: dof zinc finger protein DOF5.7-like
TrEMBL	A0A1U8N746	2e-77	A0A1U8N746_GOSHI; dof zinc finger protein DOF5.7-like
STRING	Gorai.008G094000.1	1e-77	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5242	22	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	1e-53	Dof family protein