PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678431222
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 204aa    MW: 22238.4 Da    PI: 8.7639
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678431222genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.5e-133783354
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h+e+ErrRR+riNs + +L+++lP+       K +Ka+ L +Av+ +++L
  678431222 37 NSHKEAERRRRKRINSHITTLKSILPNV-----VKTDKASLLGEAVRRVREL 83
               68*************************7.....6************998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.4153483IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.0E-133785IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-103783IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.45E-43886No hitNo description
SuperFamilySSF474591.96E-1338101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-114089IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550212.09E-7121188No hitNo description
CDDcd048731.16E-5123166No hitNo description
Gene3DG3DSA:3.30.70.2602.4E-6123183No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MFSAANAHGQ VSFSDGYMIG SGSFCPGVMD EAPASSNSHK EAERRRRKRI NSHITTLKSI  60
LPNVVKTDKA SLLGEAVRRV RELNKAAAEL STLNFYFPGE TDEVAVCRCE GNGDDNPGLV  120
KATLCCEDRP EMVVDLMQAL QSVEANLVRA EMSTIGGRTM SVLWVRLRAN DDAGVVTLKR  180
ALKIVMDKSG QAFPVSKRIR HSPS
Cis-element ? help Back to Top
SourceLink
PlantRegMap678431222
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097486.22e-57transcription factor bHLH30-like
TrEMBLA0A2G9G2382e-68A0A2G9G238_9LAMI; Uncharacterized protein
STRINGMigut.H02300.1.p7e-52(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.15e-38bHLH family protein