PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678432176
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family G2-like
Protein Properties Length: 378aa    MW: 41099.7 Da    PI: 9.5028
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678432176genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1023.8e-32216269255
    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  678432176 216 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 269
                9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.97E-15213269IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-28214269IPR009057Homeodomain-like
TIGRFAMsTIGR015578.4E-24216269IPR006447Myb domain, plants
PfamPF002495.3E-7217268IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010158Biological Processabaxial cell fate specification
GO:0010229Biological Processinflorescence development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MPIDGIFLEP SSSSSSSSQI PDLSLQISPP NCDTSSTRPH NKTISDVSHG GAAAACLTEL  60
SLASNTFKQQ NPFRPPGQLQ EQHHRDTDSS SLPIKGIPVY PGSSNRGPFP FLSSLDHSKD  120
APSKMRFYPR PWNTPPPSNS AQPYFAAGGA GVENHMLLRP NASSSYYNGG GAAAPRFLGG  180
YQGGLPGIIP IPLQSHDHMR SRFLPKIPAK RSMRAPRMRW TSSLHARFVH AVELLGGHER  240
ATPKSVLELM DVKDLTLAHV KSHLQMYRTV KTTDKPPPTS GHSEGSGEDD ISTVGSGGDR  300
PTRSQQFNDH RDLQQEADTN HPSTTPTLWS NSSSSRESWL QMNSGEPPGP MGPSSFSATS  360
DHHLVRKTSS KEMYRVQL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-16217271458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-16217271458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-16217271357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-16217271357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-16217271357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-16217271357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-16217271458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-16217271458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-16217271458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-16217271458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-16217271458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-16217271458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678432176
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551952.12e-91transcription repressor KAN1 isoform X2
TrEMBLA0A2G9GLA34e-96A0A2G9GLA3_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000346631e-82(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24682355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.11e-49G2-like family protein