PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678438722
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ZF-HD
Protein Properties Length: 81aa    MW: 9178.46 Da    PI: 8.8408
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678438722genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer91.48.1e-291165257
  ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                 ++v+Y+eC+kNhAas+G +avDGC+Efmps geeg+  al+CaAC CHR+FH+r v
    678438722 11 REVTYQECRKNHAASVGKYAVDGCCEFMPS-GEEGSGGALRCAACSCHRSFHKRVV 65
                 579**************************9.999*******************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047709.0E-281364IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015666.8E-251463IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152324.3781564IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257748.0E-161565IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    Send to blast
MNPAPRKDNE REVTYQECRK NHAASVGKYA VDGCCEFMPS GEEGSGGALR CAACSCHRSF  60
HKRVVRRLCN NCRSYCRLLR H
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678438722
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009408377.11e-23PREDICTED: mini zinc finger protein 1-like
SwissprotQ9SVL07e-21ZHD7_ARATH; Zinc-finger homeodomain protein 7
TrEMBLA0A2G9HH182e-29A0A2G9HH18_9LAMI; Uncharacterized protein
STRINGMigut.L01769.1.p4e-30(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA11052486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50890.13e-23homeobox protein 28