PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678439652
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 259aa    MW: 28685.3 Da    PI: 5.2769
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678439652genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.73.2e-061241641055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                rr R+ + ++   L +llP+      +K++ a++Le A +YI+ Lq
  678439652 124 RRKRQTLSEKAKSLHDLLPWG-----QKMDIATVLESAYKYIRFLQ 164
                788999**************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.001114163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0043120169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-9124177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.7E-9124172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.94E-6124168No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MEFHNQPLHL GGGETSVSQY TGADDAYLNG DYANVSFRSL LTYGSLNKEE EMLDSLEVPT  60
TEPSTVAIYD VNVSPFDYFA VAVPPRLHYH FPVTDFVSCK LPLKRAAVDS PNLHSETTSF  120
NQKRRKRQTL SEKAKSLHDL LPWGQKMDIA TVLESAYKYI RFLQAQISAL QSMPSEACYT  180
SPNAGSTILC GNLGLLNRQQ LLQAVVNSQV SQAQLFSKSC CVHSVEQVLG LMNNAAAESE  240
GLYQEMLFGS CYSSDLFFP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678439652
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028095385.13e-37uncharacterized protein LOC114295352
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112501821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.12e-15bHLH family protein