PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678440020
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 256aa    MW: 28243.6 Da    PI: 5.7647
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678440020genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-1790136454
        AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                +GVr++k +g+W+AeIrdp     + kr +lg++ taeeA ka++  r++l+
  678440020  90 RGVRQRK-WGKWAAEIRDPI----QqKRLWLGTYNTAEEASKAYESKRRELK 136
                8*****9.**********82....36**********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381234.3E-328242IPR017392AP2/ERF transcription factor ERF/PTI6
SMARTSM003802.3E-1688150IPR001471AP2/ERF domain
PROSITE profilePS5103218.71688147IPR001471AP2/ERF domain
PRINTSPR003671.0E-889100IPR001471AP2/ERF domain
CDDcd000185.59E-2190128No hitNo description
PfamPF008476.5E-1190136IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-2090136IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-1590135IPR016177DNA-binding domain
PRINTSPR003671.0E-8111127IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MPALGNRSPC IQEDMNKKKR FKPETRQSVR KIKIICSDPY ATDSSDDDQP PGKKRKDIIN  60
EVCISAACPV LKPPESRSRP KPFSDIGKGR GVRQRKWGKW AAEIRDPIQQ KRLWLGTYNT  120
AEEASKAYES KRRELKALSD EIFSNLDVHS LAPCNTNASF PSSAPDTDSS AAKPLSGSGL  180
IPGIKGDTNL ELEFSSLLSE HDFATPFDDF TLADLPLYST EDDGVHPSSL LHSSFDSDFN  240
FSSVCGESFP LPFDAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11522NKKKRFKP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678440020
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G9GJ626e-37A0A2G9GJ62_9LAMI; Uncharacterized protein
STRINGMigut.E00335.1.p5e-31(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-24ERF family protein