PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678443273
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 204aa    MW: 22718.1 Da    PI: 7.9779
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678443273genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-1093140455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  678443273  93 SHSLAERARREKISERMRILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 140
                8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.22E-987144No hitNo description
SuperFamilySSF474595.89E-1887157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.72689139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-1889158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.9E-893140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-1095145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MGAEQQRFNH NQNTFGIDKS RKRRDGDESA KAGASTSIAG PANNNNAMSE CDAKRLKPSE  60
SSRENCDNEE QPSEAPKQDY IHVRARRGQA TDSHSLAERA RREKISERMR ILQDLVPGCN  120
KVIGKALVLD EIINYIQSLQ RQVEFLSMKL EAVNARVSLE GYPSKDHFSQ QSFDASNIAF  180
GSQSSRGYGR GSEWLHMQIG GGCE
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678443273
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021616639.11e-80transcription factor BHLH089-like
SwissprotQ69WS34e-66BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A0H3YBU59e-82A0A0H3YBU5_SALMI; Basic helix-loop-helix transcription factor
STRINGcassava4.1_013977m6e-80(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-63BIG PETAL P