PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678444151
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 225aa    MW: 25309.5 Da    PI: 4.6747
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678444151genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.8e-09120164655
                HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                +++ rrRR++i ++ +eL +l+P         K++ a++L+ A +YIk L+
  678444151 120 SAAARRRRRKISERTHELGKLVPGgH------KMNTADMLRAAYKYIKFLE 164
                6788*******************955......****************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.22E-13112174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.96114163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-12117172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-7120164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-11120169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.73E-5129167No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MALSSFGHSN CAAIGPEMSV LEVPPESVCF PDCFCVDSIF SDLPFTVTPP DSLAFFQEPK  60
SEHQPEPFFF DQDFEFFKGY ENGQFNDGFH FPSLCFDASF PDTPEFAAPQ KEQSVVSTQS  120
AAARRRRRKI SERTHELGKL VPGGHKMNTA DMLRAAYKYI KFLEAQVGVL QIMNSKQGNG  180
TGDEEMQWLV QSPLIQEKLY SAEKCVVSQK CFEEATQKAE ESMKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap678444151
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G9G0225e-38A0A2G9G022_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38562246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.18e-25bHLH family protein