PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678444337

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

bHLH

Protein Properties

Length: 115aa MW: 13174 Da PI: 9.7181

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678444337	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.2	1.7e-09	76	105	1	30
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPka 30 +r ah Er+RR+++N+ ++ Lr+l+P+ 678444337 76 QRLAHIVSERNRRRQVNDYLAVLRSLIPPT 105 699*************************84 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.04E-8	67	106	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	10.925	75	115	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	8.9E-7	76	105	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.08E-7	76	109	No hit	No description
Gene3D	G3DSA:4.10.280.10	7.3E-7	76	105	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 115 aa Download sequence Send to blast
MAEFYHENES TLTGGLDEMV TQNSGHTPLP LNEFLGSKNP TFLFASPHTG CPAPVPIRRH 60 RRGVRSKKNE EDAEIQRLAH IVSERNRRRQ VNDYLAVLRS LIPPTYPIRV RFPLD

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678444337

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1996	24	62

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-13	bHLH family protein