PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678444683
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 148aa    MW: 16373.1 Da    PI: 9.1789
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678444683genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.8e-0537711554
               HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
               ++ +++ +L++l+ +      +K + a++L +A eYIk L
  678444683 37 KLTERITTLQQLISPY-----GKTDTASVLLEALEYIKFL 71
               7789999999999999.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.21E-62076No hitNo description
PROSITE profilePS5088811.2612271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-112384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00583077IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-83180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MHHKRVPVSL DQSSCLDLMP KRLKTIAPFS SKEKKEKLTE RITTLQQLIS PYGKTDTASV  60
LLEALEYIKF LHEQVKVLSA PYLYSTPMKP QEECAGLAAK GLCLVPVSFT VGVASSNGAD  120
IWAPVKANSR RLFPNEMSIV NQTLIDNA
Cis-element ? help Back to Top
SourceLink
PlantRegMap678444683
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091560.15e-69transcription factor bHLH113 isoform X1
RefseqXP_011091561.14e-69transcription factor bHLH113 isoform X2
RefseqXP_011091562.14e-69transcription factor bHLH113 isoform X2
SwissprotQ7XJU28e-47BH153_ARATH; Transcription factor bHLH153
TrEMBLA0A2G9GQ118e-68A0A2G9GQ11_9LAMI; Uncharacterized protein
TrEMBLA0A4D9C2D21e-65A0A4D9C2D2_SALSN; Uncharacterized protein
STRINGMigut.N03067.1.p2e-64(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10428811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.53e-49bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]