PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678445275
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 240aa    MW: 26447.8 Da    PI: 8.686
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678445275genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.30.000161411811055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                r RR++i +++  L +l+ +      +K + a++L + +  I+ Lq
  678445275 141 RVRREKIGDRITALHQLVSPF-----GKTDTASVLSESIASIRFLQ 181
                78******************8.....8*****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.42131180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.05E-6141185No hitNo description
SuperFamilySSF474595.37E-10141193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-8141188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MFTPTSGGDL GGGGEDQGRF GSRCFMQQPA QSISHQLCVC DELPLSRQPV FWPFGTSSSR  60
NAMDFPREGT DTDHRSKNHK HTQNGGHPYE GLSNCLSISF IFFDSSLVLI PVFKHNSIRS  120
TADGASKKAR AQQLPAQPAL RVRREKIGDR ITALHQLVSP FGKTDTASVL SESIASIRFL  180
QTQIQALCTP YMREQYSESR SKQKDLRSKG LCLVPISCTH YVENSTGTDY WGPSSLVGGF
Cis-element ? help Back to Top
SourceLink
PlantRegMap678445275
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020548665.12e-46transcription factor bHLH68 isoform X3
STRINGXP_009608011.18e-43(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15192247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.17e-34bHLH family protein