PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678445349

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

G2-like

Protein Properties

Length: 227aa MW: 24416.2 Da PI: 6.7218

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678445349	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.8	7.5e-31	49	102	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k+rlrWt++LHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQ R 678445349 49 KQRLRWTHDLHERFVDAVSQLGGPDRATPKGVLRIMGVQGLTIYHVKSHLQVQR 102 79*************************************************877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.272	46	106	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	8.3E-29	47	102	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.51E-15	48	103	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.8E-24	49	103	IPR006447	Myb domain, plants
Pfam	PF00249	1.8E-7	51	100	IPR001005	SANT/Myb domain
Pfam	PF14379	7.4E-10	97	124	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence Send to blast
MHQPNAVPNP SLVNTSPGLL HPTVDCGTNA MDPAAGSNGA NSNRNSASKQ RLRWTHDLHE 60 RFVDAVSQLG GPDRATPKGV LRIMGVQGLT IYHVKSHLQV QRQLQLRIEA QGKYLKKIIE 120 EQQRLSGVLS EAPGLGADTG PLDPENMDPP TPVPTSESPP MDNPPKELAP GQSSHSVEES 180 FLQHEPLTSD SDTPTARPAK KQRSSNDSSF SKPCMAPTNS ILESSLS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	9e-22	49	107	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	9e-22	49	107	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	9e-22	49	107	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	9e-22	49	107	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	9e-22	49	107	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	9e-22	49	107	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	9e-22	49	107	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	9e-22	49	107	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678445349

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020554068.1	2e-79	uncharacterized protein LOC105175200
Swissprot	Q9SJW0	4e-51	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2G9GE95	8e-83	A0A2G9GE95_9LAMI; Uncharacterized protein
STRING	VIT_00s0475g00040.t01	2e-75	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2796	24	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	4e-43	G2-like family protein