PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678447639

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Protein Properties

Length: 200aa MW: 22544.4 Da PI: 4.8782

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678447639	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.5	9.8e-13	85	180	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkld.gr.sefelvvkvf 97 f+ v +s+v++ ++++p++ + +t + ++++W+ + +k +r l+ +GW Fvk+ L++gD +vF+++ +r s e++v+++ 678447639 85 FDVVICKSHVGSCPQMYIPRRINDVLP----HATTRAFIRYQNKTWNTVY--YGKESRPRLRcAGWVAFVKDSSLRVGDACVFEVMqNRrSMIEFRVQIL 178 6667789999999999*99863333....33467788999****..555556555558******************8734457777788887 PP -S CS B3 98 rk 99 r+ 678447639 179 RR 180 76 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.40.330.10	2.4E-14	82	181	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	3.14E-14	82	182	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	5.20E-13	83	179	No hit	No description
SMART	SM01019	0.0015	85	181	IPR003340	B3 DNA binding domain
PROSITE profile	PS50863	10.25	85	181	IPR003340	B3 DNA binding domain
Pfam	PF02362	3.7E-10	86	180	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence Send to blast
MAGSFSTPIV ILSDEEEPTN EISPVGEFTG RRATRSTVKF QNADETASEA TEPETESEEE 60 DCADKLDGEG IDEDGSLYLT GKPRFDVVIC KSHVGSCPQM YIPRRINDVL PHATTRAFIR 120 YQNKTWNTVY YGKESRPRLR CAGWVAFVKD SSLRVGDACV FEVMQNRRSM IEFRVQILRR 180 DVPPELAAYL ENKGGVQKLL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678447639

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G9I5V7	7e-33	A0A2G9I5V7_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1819	21	54