PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678447645
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 483aa    MW: 53997.1 Da    PI: 6.5258
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678447645genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-10303347554
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                h + Er+RR+r+N++f+  r++lP+       K +Ka++L   ++Y+ +L
  678447645 303 HTMSERKRRERMNESFQIFRSMLPPG-----SKKDKASVLSGITNYLVEL 347
                999*********************95.....4999999999999998665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.954298347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-15301368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.00E-9303352No hitNo description
PfamPF000101.2E-7303347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-13303366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-10304353IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    Send to blast
MRRVSGNGLH LQTRPRRSDG GPPPDDAVFE LHAHLCLVPY APSISSSSVP ATLGAQLFTL  60
YRESVHYFDG VPGLAFENSL PYMELMSHDF SKMVLNLVQQ QFYQEARVKK NEVIVVSDKT  120
HFDMIEQTLV FMASSFGEIE LGLPYDPLAD METRIKGLLA SMFSGQTGQE DPSSSSLQSS  180
TMETAEFPYL HSIPTWAGLG VRSGDETSGE DAVARIRLPN REMEDDIMTK AIIEVLGSRD  240
TGSPSSSRQR SGAFGRYERR PVPPIVRSPR QNMIKRSFSL LRKLSMSRMQ ETRNPITPSH  300
LYHTMSERKR RERMNESFQI FRSMLPPGSK KDKASVLSGI TNYLVELKSQ VEQLTKRNHE  360
LETRLMVQQQ GAGGELPPEE DSTDVSADVE VSLAQVSHSS SESRTVDLRV TFIGENRNIT  420
TPLARILELL ERSKNLSLTS VQTSAWTVAS GTVHRLSLRL EIEGDEFDES GLMQAVTRVA  480
KDK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1306311ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678447645
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45672339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.17e-36bHLH family protein