PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678447866
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 261aa    MW: 29193.8 Da    PI: 4.8162
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678447866genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP100.62.7e-3144107265
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65 
                +g+kdrhsk++T++g RdRRvRls ++a++f+d+qd+LG+d++sk+i+WL+q+ak+ai +l   
  678447866  44 PGRKDRHSKVSTARGARDRRVRLSPKTAIQFYDVQDRLGYDRPSKAIDWLMQEAKAAIEALDAP 107
                589********************************************************99766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.8E-2945106IPR005333Transcription factor, TCP
PROSITE profilePS5136929.89746104IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MPWRAKRMVL FMQMDFLHRM ELEDSGGGFK GEQVDCCDRV LRCPGRKDRH SKVSTARGAR  60
DRRVRLSPKT AIQFYDVQDR LGYDRPSKAI DWLMQEAKAA IEALDAPPTL PLPPPPVPSA  120
NDEDSYYYYC DDKCLIDEAP TRSPSMLCHE NGYFAAPLTE RDSEVFDSEI ERMQRIFGCS  180
NDDATGAGVG GAAFFSHPAV APLHFPETPL FCQGEIFSHR EPLQSSNSYS RMSTFSSLSS  240
QFPGINDELA AIISTVADAD Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zkt_A1e-1851104154Putative transcription factor PCF6
5zkt_B1e-1851104154Putative transcription factor PCF6
Cis-element ? help Back to Top
SourceLink
PlantRegMap678447866
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G9I0L43e-53A0A2G9I0L4_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41122145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.19e-30TCP domain protein 10