PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678448954
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Trihelix
Protein Properties Length: 295aa    MW: 33161.2 Da    PI: 5.9919
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678448954genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.88.9e-1616106186
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                +Wt++   +Li+a  ++  +l+rg+l++++W+ev++ +     ++++ +r+ +qCk++++ l+k+yk +k    +    ++s++p+f++++
  678448954  16 CWTEEASSTLIDAWGRRYLDLNRGNLRQKDWQEVAEEVnalhgHSKKTRRTDVQCKNRIDTLKKKYKVEKVKIAESDGARTSSWPFFSRMD 106
                7*****************************************999**********************9998888888888999******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.2E-2515107No hitNo description
Gene3DG3DSA:1.10.10.605.5E-41684IPR009057Homeodomain-like
PROSITE profilePS510299.10817113IPR006578MADF domain
SMARTSM005955.8E-424113IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MDSEAPPRQT PTRDDCWTEE ASSTLIDAWG RRYLDLNRGN LRQKDWQEVA EEVNALHGHS  60
KKTRRTDVQC KNRIDTLKKK YKVEKVKIAE SDGARTSSWP FFSRMDFLIG SSSTKPQSKP  120
NLSTPSSTGA QSTPIMRLPS PPMALPLPYD RGLPPAMVTP VVMPQKRPLS SPALDGSYSL  180
RNYSAMAAAA AAAAEDEDGD TDGDEEEGSE DGDAQGEESW LQGMRKVADA IEKFGEIFER  240
VEKKKQKLIL DLEKQRMLFV QDLEVRRMQW FTDTLAQQQK KKQAKRSGSS DDAYQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678448954
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101388.11e-119trihelix transcription factor ASIL1 isoform X3
TrEMBLA0A4D9AYE41e-110A0A4D9AYE4_SALSN; Uncharacterized protein
STRINGMigut.M01037.1.p1e-102(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.14e-52sequence-specific DNA binding transcription factors