PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678449614
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 193aa    MW: 22159.3 Da    PI: 6.2679
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678449614genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.61.1e-08159183730
                HHHHHHHHHHHHHHHHHHCTSCC.C CS
        HLH   7 erErrRRdriNsafeeLrellPk.a 30 
                ++ErrRR+r+N++++ Lr+++Pk +
  678449614 159 MAERRRRKRLNDRLSMLRSIVPKiS 183
                79********************955 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.09E-7149187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.362152193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.2E-6159183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-6159182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MEQQQQQFMH SALRERMMMM MDPRILHSSF CNEIQVPQSF TCLDQPQEVL FPSETYTSSF  60
MELIAPQEST FSCLLGEFQP FLDGAFCEGV NFQPLQVAQE EYQAGMGNGH TVFDENSKSQ  120
FEDSVNMFKV GIAAADIGPY GERSWKSKKP DGLPSKNLMA ERRRRKRLND RLSMLRSIVP  180
KISKAKYTII YTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160167ERRRRKRL
Cis-element ? help Back to Top
SourceLink
PlantRegMap678449614
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099455.13e-21transcription factor bHLH93
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7892497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.13e-12beta HLH protein 93