PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678450982
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 248aa    MW: 27455.2 Da    PI: 6.1006
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678450982genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.6e-1367113354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                ++h+e+ErrRR+riN  +++Lr+l+P++     +K++Ka+ L ++++ +k+L
  678450982  67 KSHSEAERRRRERINAHLATLRDLVPHD-----EKMDKATLLAEVINQVKHL 113
                58*************************9.....8****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.1E-1361116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.84764113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.94E-467115No hitNo description
PfamPF000104.8E-1167113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-1467118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-1370119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00611149202No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MMYCGDAAAA CDLSFGKFSE NWGSGLAADE SLVLDDEKED LVMGSGATNE KKMGGASLES  60
KSRAALKSHS EAERRRRERI NAHLATLRDL VPHDEKMDKA TLLAEVINQV KHLKTSATQA  120
CKDTHIPLDS DEVKVDIVED EGTLLMKASL CCDYRHDLMS HIRKAVHELG LMVLKCEVST  180
LGGRVKSVLL FRDQCDNAES WEAMKFSVRS AFNGILNSIS ASAEFDQQLL YTQKRRRFSS  240
MDSSCLSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17277ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678450982
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830318.12e-69PREDICTED: transcription factor bHLH30-like
TrEMBLA0A2G9H6A16e-74A0A2G9H6A1_9LAMI; Uncharacterized protein
STRINGMigut.H01448.1.p7e-69(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67302230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.14e-32basic helix-loop-helix 32