PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678452382
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family G2-like
Protein Properties Length: 323aa    MW: 35308.6 Da    PI: 9.9358
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678452382genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.88.9e-32138191255
    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                pr+rWt++LH+rFv+ave LGG+e+AtPk +lelm+vk+Ltl+hvkSHLQ+YR+
  678452382 138 PRMRWTTTLHARFVHAVELLGGHERATPKLVLELMDVKDLTLAHVKSHLQMYRT 191
                8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.81E-15135192IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.1E-28136192IPR009057Homeodomain-like
TIGRFAMsTIGR015571.0E-22138191IPR006447Myb domain, plants
PfamPF002492.8E-7139190IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MELFPAQPDL SLRISPPTGQ PGSFCGGVGE DGDAERMGKI GCWNKAVESV RSSFSFANSS  60
PAPGSYNGGV AGDGFFRSFP QANERRFISG FPVFQSYPLP NIDSTGVNGG CHQHSPAGPL  120
LRSHFFQRMP EKRSIRVPRM RWTTTLHARF VHAVELLGGH ERATPKLVLE LMDVKDLTLA  180
HVKSHLQMYR TVKSTDKAAA TSGHSSAGFD TGDTSDDLHI ESSRRNGRCS DQNDQGKNVH  240
LGLWSSSSAS YSREALLHGR PHLSTGTMQS FQVHTALARL LSWHPLHIAK KQDKKQYQKM  300
GGALYAEGGE GAGDELAVRR RRA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-16139193357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-16139193357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-16139193357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-16139193357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678452382
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022756946.13e-65probable transcription factor KAN2 isoform X2
TrEMBLA0A2R6PIA21e-65A0A2R6PIA2_ACTCH; Transcription factor KAN2
STRINGEOY251944e-63(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27382255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.14e-46G2-like family protein