PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678452635
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 402aa    MW: 43890.1 Da    PI: 6.7966
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678452635genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.71.5e-063163841055
                HHHHHHHHHHHHHHHCTSCC.C.........................TTS-STCHHHHHHHHHHHHHHH CS
        HLH  10 rrRRdriNsafeeLrellPk.as......................kapskKlsKaeiLekAveYIksLq 55 
                + RR ri +++ +L+el P+ +                           +  s a++L +Av+YIk+Lq
  678452635 316 QMRRTRISEKMKKLQELFPNmDKvssspchaspdlinqqlptvvtPFLLQQTSTADMLDLAVRYIKDLQ 384
                57******************888*********************95555679****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.563306383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-7316336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.17E-5318388No hitNo description
Gene3DG3DSA:4.10.280.102.2E-7319388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-7365390IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MSISRSNSGV GSFIASNSSA NQQVEIQLLK SREFVGPDLF QQSPGLARYR SAPSSFLGAL  60
LDPPPDVNSS GDESEALYSA IWTGPLDLNH KGSDDDMQFQ TKQGISGYEI TPPGGGGGSV  120
VGSYTLGMEN QVQVSMSTGN RIAGSTNLVR QSSSPAGVFN GFAVKGEELG NYRSKSVVSG  180
VSSNHLNYSP CPSSSLRVMP SIPENRSMED QQSRNGTSRE FEASLSQGSW SESLFSDLKR  240
DHDGNLKMFT AYNQSQSEET EKSLRPSLTH HLSLPKTFSN DNGDTEKLKF LQFQREVVPC  300
QIRAKRGTSP VAFNLQMRRT RISEKMKKLQ ELFPNMDKVS SSPCHASPDL INQQLPTVVT  360
PFLLQQTSTA DMLDLAVRYI KDLQMQVQLD PLPLSPPARA VP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678452635
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087339.11e-108transcription factor bHLH130
TrEMBLA0A2G9FZD63e-95A0A2G9FZD6_9LAMI; Uncharacterized protein
STRINGMigut.B01333.1.p5e-72(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44352238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-28bHLH family protein