PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678453215
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 113aa    MW: 12825.2 Da    PI: 8.0942
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678453215genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.22.4e-101546234
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkg 34
                     g WT+eEde+l++ ++  G+g+W++++++ g +
        678453215 15 GQWTAEEDEKLIQWIQANGPGNWRSVPKKAG-T 46
                     78***************************99.4 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.1E-12544IPR009057Homeodomain-like
PROSITE profilePS5129410.44977IPR017930Myb domain
SuperFamilySSF466892.44E-8945IPR009057Homeodomain-like
SMARTSM007178.2E-41375IPR001005SANT/Myb domain
PfamPF002492.0E-81546IPR001005SANT/Myb domain
CDDcd001672.08E-61746No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    Send to blast
MGRSPCCDKS GLKQGQWTAE EDEKLIQWIQ ANGPGNWRSV PKKAGTLFHF IQYYDGLGHP  60
NSESCRSRAS EVREELPTPV DELPEAGYQE GEVHFRGRRG PHPPSQHSRK QVR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678453215
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB7ZYQ37e-24B7ZYQ3_MAIZE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.14e-20myb domain protein 41