PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678453609
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ARR-B
Protein Properties Length: 248aa    MW: 27324.6 Da    PI: 9.0188
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678453609genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like25.62.8e-08222243122
    G2-like   1 kprlrWtpeLHerFveaveqLG 22 
                k+r++W+ +LH++Fv+av+q+G
  678453609 222 KARVVWSVDLHHKFVQAVNQIG 243
                68******************96 PP
2Response_reg50.31.4e-176615026109
                   EEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
  Response_reg  26 vaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                   v+++  g+ a+  l+e +  +D++++Di+ ++mdG++l+++   e  +lp+i+++a ge++ +++ +++Ga ++l Kp+  +++++
     678453609  66 VTTCHLGRVAMFFLREGRgrFDIVICDINVSDMDGYKLVQHVGLEM-DLPVIIMSADGEMDRITKGVQYGACGYLLKPVRAKDIRD 150
                   66666677777777777777**********************6644.8*******************************9999976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521724.01E-231356IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.1E-2814163No hitNo description
SMARTSM004481.7E-1115152IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011028.38616156IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.79E-1618150No hitNo description
PfamPF000727.8E-1465150IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521724.01E-2384164IPR011006CheY-like superfamily
Gene3DG3DSA:1.10.10.609.8E-8219245IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MEAGAAVEGG SPEGLRVLVV DDDLTSLNSL AKMLHRCKYQ GSRLSFLSIL LHLCKKKIHV  60
VASLAVTTCH LGRVAMFFLR EGRGRFDIVI CDINVSDMDG YKLVQHVGLE MDLPVIIMSA  120
DGEMDRITKG VQYGACGYLL KPVRAKDIRD IRMHALRRRV LVEGRIKEGS LFEEKKSGFF  180
FSADYAHGQR KKEAADKKPN DGVSCSGDAT SSSSSATTTT KKARVVWSVD LHHKFVQAVN  240
QIGIESEP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678453609
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071178.12e-62two-component response regulator ORR26
TrEMBLA0A022Q3L98e-61A0A022Q3L9_ERYGU; Uncharacterized protein
STRINGMigut.E00229.1.p1e-60(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67882433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.13e-52response regulator 11