PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678453689
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 191aa    MW: 21485.5 Da    PI: 6.9499
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678453689genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.1e-163481354
        AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
               y+GVr +  +grWv+eIr+p++   + r++lg+f ta++Aa+a++ a+ + +
  678453689 34 YRGVRMRA-WGRWVSEIREPKK---KSRIWLGTFATADMAARAHDVAAMAVK 81
               9****998.**********854...6*********************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.6033390IPR001471AP2/ERF domain
SMARTSM003809.8E-353396IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.0E-313391IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-203490IPR016177DNA-binding domain
CDDcd000182.65E-313491No hitNo description
PfamPF008473.4E-113482IPR001471AP2/ERF domain
PRINTSPR003675.2E-103445IPR001471AP2/ERF domain
PRINTSPR003675.2E-105672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MDDQHTMVAP PEKRKRKCGT TVKQELRQKQ SVEYRGVRMR AWGRWVSEIR EPKKKSRIWL  60
GTFATADMAA RAHDVAAMAV KGSSAVLNFP EIADLLPRPA TSSPRDIQAA ATKAALLGQP  120
PRSPPSFIDS DLSTGPEELE QIVELPKLGC GEEFTTVVDN RVWEYEDYDQ APFFLSLHKE  180
DLDGLLWKHV V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1633951477Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678453689
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By UV LIGHT. {ECO:0000269|PubMed:16307362}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093630.15e-49ethylene-responsive transcription factor TINY-like
SwissprotQ9LU181e-43ERF36_ARATH; Ethylene-responsive transcription factor ERF036
TrEMBLA0A2G9H8149e-50A0A2G9H814_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000478048e-47(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.14e-34ERF family protein