PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678455132
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family S1Fa-like
Protein Properties Length: 715aa    MW: 78288.4 Da    PI: 6.9956
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678455132genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA25.13.5e-08308343641
       S1FA   6 veakGlnPGlivllvvgglllvflvgnyilyvyaqk 41 
                   kG+nPGli+l+ v+    v +vg  i+yvy +k
  678455132 308 HRKKGMNPGLIILITVADAAAVAFVGMVIVYVYWKK 343
                557******************************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF082633.2E-82565IPR013210Leucine-rich repeat-containing N-terminal, plant-type
Gene3DG3DSA:3.80.10.107.7E-5626264IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520581.84E-4329285IPR032675Leucine-rich repeat domain, L domain-like
PfamPF046893.4E-5309344IPR006779DNA binding protein S1FA
PROSITE profilePS5001133.206422715IPR000719Protein kinase domain
Gene3DG3DSA:3.30.200.202.1E-15425483No hitNo description
SMARTSM002201.7E-13426688IPR000719Protein kinase domain
SuperFamilySSF561127.96E-62427705IPR011009Protein kinase-like domain
PfamPF000692.4E-36427647IPR000719Protein kinase domain
CDDcd140662.84E-84428710No hitNo description
Gene3DG3DSA:1.10.510.106.3E-36484647No hitNo description
PROSITE patternPS001080542554IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0005634Cellular Componentnucleus
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    Send to blast
MWLPFVVFLE LGLLLASSVT CLTIDGLSLL SLKSAVDGGS AAISAFSNWN DGDETPCNWS  60
GIECSNIPGL DEPRVVRVSV AGRNLRGYIP SELGELSYLR QLNLHGNNFY GSIPAQLFNA  120
SSLHTLFLNS NNLSGPLPPS LCTHVRVENV DFSNNSLSGP LPEFLRNCTE LRRLILARNK  180
FSGEIADNIF PGLANLEQLD LSVNMFSGPI PVDIGELKSI TGTLNLSFNH FTGNIPETLT  240
NLPLTARFDL RNNDLKGEIP RSGSFANQGP SAFLNNPDLC GFPLQTRCKN DSDFKSTTPD  300
ASGNNGVHRK KGMNPGLIIL ITVADAAAVA FVGMVIVYVY WKKKDSHGCS CTRTARLGGS  360
GKVHNGCVFP CMSTHSFNDS EMEMEMESEK SGGCTSRGTS CGEGELVAVD KGFSFELDEL  420
LRASAYVLGK SGIGIVYKVV LGNGVPVAVR RLGEGGQQRY KDFVSEIQVI ARVKHPNIVK  480
LRAYYWAPDE KLLISDYISN GNLASALRGN ENQMLSWRTR LKIAKGVARG LVYLHEWSSH  540
KFIHGDIKPT NILLDDEFRP YISDFGLKRL VNITGNNPSP GGLLPYVKTS QPEKPNHYRA  600
PEAMISGARP TQKWDVYSFG VVLLEMLTGK SPELSPPTTS TATEVRDLVG WVKRGFTQES  660
PLSEMVDPLL LQEVYAKKEI LSVFHIALAC TETDPEIRPR IRIVSENLDR VGMQS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3uim_A1e-4341571320311BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3ulz_A1e-4341571320311BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678455132
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027152763.10.0receptor protein kinase-like protein ZAR1
TrEMBLS8DZL50.0S8DZL5_9LAMI; Uncharacterized protein
STRINGSolyc05g015150.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA779055
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12020.29e-11WRKY family protein