PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678455565
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 245aa    MW: 27312.3 Da    PI: 6.0603
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678455565genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding285.2e-097292346
                     -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                     +W+ Ia+ ++ gRt++++k++w++
        678455565  7 RWSVIAAQLP-GRTDNDVKNHWNT 29
                     6*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.81135IPR017930Myb domain
SuperFamilySSF466893.51E-8538IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-12642IPR009057Homeodomain-like
PfamPF002497.2E-7629IPR001005SANT/Myb domain
CDDcd001671.96E-6731No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MVPNSHRWSV IAAQLPGRTD NDVKNHWNTK LKKKLSGMGI DPVTHKPFSH LITEIATLPP  60
PQAPNLAEAA LGCFKDEMLH LLTKRRAVDA SMQQQQHLHH QAPLQQQQQQ HFGGLMMNHH  120
HVKHDEDNEE TIKKIKFGVS KAIREDEYHT SGNSWDPTGA TSTYLGGFSS FPGADSDGFQ  180
CDLIGNEGDV SSWTHSMCTG STCAPRDDHE SAQDSEKETR LETNIFNTDC TLWDLPSEDL  240
INPGI
Cis-element ? help Back to Top
SourceLink
PlantRegMap678455565
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554535.14e-90transcription factor MYB80
TrEMBLA0A0K1SB772e-88A0A0K1SB77_REHGL; R2R3-MYB protein
TrEMBLA0A2Z7A0662e-88A0A2Z7A066_9LAMI; Uncharacterized protein
STRINGMigut.H01721.1.p5e-79(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.12e-43myb domain protein 103