PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678456691
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family GATA
Protein Properties Length: 579aa    MW: 64185.6 Da    PI: 6.4651
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678456691genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA36.94.9e-126693835
       GATA  8 kTplWRrgpdgnktLCnaCGlyyrkkgl 35
                TplWR+gp  ++ LCnaCG ++r kg+
  678456691 66 GTPLWRNGPPEKPVLCNACGSRWRTKGT 93
               6********88888***********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd002024.52E-1143112No hitNo description
SMARTSM004010.003954112IPR000679Zinc finger, GATA-type
SuperFamilySSF577163.14E-66598No hitNo description
PfamPF003208.3E-106693IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.103.3E-86693IPR013088Zinc finger, NHR/GATA-type
PfamPF139195.3E-11337423IPR028020ASX homology domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    Send to blast
MRRSVLLGYQ DSSVVHELLR REHGISMGLG SNEQYQISWC NGSCETNCSS DQIVSNILVK  60
TQLKIGTPLW RNGPPEKPVL CNACGSRWRT KGTLANYTPL HARPEHDESD TRHPMFRAAS  120
SRSKELKVLK RKLTNDVGEI GIPHLETRHG VHEGFDEDTS NRSSSGSAIS NNESCAQYGS  180
ADASELTGPS QASSAWDSTV PSRKRSCFLR TRQSPVEKLT KDLYTIWHQQ QASCLSGSSE  240
EDLLLESDKP MVSVEIGHGS VLIRHPNSVT REEESEASSH SFESKLLSSG RMASFSDYVE  300
DSVANRSFMG ARQFNKSANQ GAFLRSGRGA DQMDNFQILA SHGSPLRLVD LQDILNYEEF  360
SDKLTNDEQQ KLLKLLPTVD SVGTSDSLKM MFSSVQFRDN ILSFQKLLGE GVFDGSASGI  420
STEDCKNLKK HILSDQRKSS WVEQYTRLKD SKGKNNMEIE MLEGCNGFAT ARPMSMSKPR  480
DGQHKKLPGP NAMLKTPATE GVKLSNKDSS LSRANGIFPF QNEDLCSISD VNIESYEEDL  540
LIDVPSNNIY PESELLIPIT GKESSSSSSV FQVHFLHPR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678456691
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006359221.11e-162PREDICTED: GATA transcription factor 26-like
SwissprotQ8W4H11e-106GAT26_ARATH; GATA transcription factor 26
TrEMBLM1CHE61e-160M1CHE6_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000675061e-161(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20892462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.21e-100GATA transcription factor 26