PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678457407
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 329aa    MW: 36282.9 Da    PI: 7.3254
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678457407genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-174796255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  678457407 47 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 96
               59*******.**********93....35999**********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.8E-114796IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-2147104IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-2947103IPR001471AP2/ERF domain
SMARTSM003802.1E-3447110IPR001471AP2/ERF domain
CDDcd000181.22E-2947103No hitNo description
PROSITE profilePS5103222.08947104IPR001471AP2/ERF domain
PRINTSPR003671.7E-94859IPR001471AP2/ERF domain
PRINTSPR003671.7E-97086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MEEALRRLND TLSADPYPPL ATAVPKRCAA TKRPINTTTG TGVGAMRYRG VRRRPWGRYA  60
AEIRDPQSKE RRWLGTFDTA EEAACAYDCA ARAMRGVKAR TNFVYPNPPQ ESLIHPFGHR  120
NQSQPSFLGA TSSPSLGNPS FPSLDMLFLR DYFNSPTSKF PEAPSSVNLQ LPDIMPAHQN  180
DFVAIAAAKF PTGSVKGVDP VADHTETMMS FFPTEISGSG LLQEVLNPFF PTPRTEAKLK  240
PDAPRQHAAM EDRNIEGRGC KDVFLGLPID HHHRFPSHPQ FQTLESLVAI NQPSDNDDVV  300
PVATTNGFLG DIFHYQEALN LLAAKAQNV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-2040103571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678457407
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086646.13e-86ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2G9GV383e-80A0A2G9GV38_9LAMI; Uncharacterized protein
STRINGMigut.K00605.1.p1e-81(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.16e-19DORNROSCHEN-like