PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678457517

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

bHLH

Protein Properties

Length: 212aa MW: 24498.1 Da PI: 8.2864

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678457517	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.3	6.4e-09	46	96	1	53
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 rr + +Er+RR+++ + Lr+llP +K s ++ +++++YIk+ 678457517 46 RRIMRRDIERQRRQQMAALYTCLRSLLPLqY---IRGKRSMSDHMQETMDYIKN 96 6888899********************66...****************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.322	45	97	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.95E-9	45	102	No hit	No description
SuperFamily	SSF47459	6.8E-11	45	111	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.6E-6	46	96	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	7.9E-7	46	109	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence Send to blast
MLPCSADQHL MLNSPPALFR QDFAPFKEDS GARNGVEEKN EFQMKRRIMR RDIERQRRQQ 60 MAALYTCLRS LLPLQYIRGK RSMSDHMQET MDYIKNTERK IQELRELRER MIDNGCGRRS 120 ACPDRASFHV SLSSFGGRSG VVVLVSCKDE EGIPLSRILI ELINSNLTVI CCVSARASDR 180 LLYTIHSEVN LDLHPPGFEE FFISPPRYSQ NE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678457517

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	9e-20	bHLH family protein