PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678458595
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 163aa    MW: 19137.7 Da    PI: 6.141
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678458595genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.9e-1695140247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT eE+ +++++ +++G+g+Wk+I+r+  k+R + q+ s+ qky
        678458595  95 KPWTVEEHRRFLQGLEKYGKGDWKSISRYALKTRNPTQVASHAQKY 140
                      58*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.214154IPR017877Myb-like domain
SMARTSM007171.7E-4456IPR001005SANT/Myb domain
SuperFamilySSF466894.83E-9656IPR009057Homeodomain-like
CDDcd001671.23E-4754No hitNo description
Gene3DG3DSA:1.10.10.604.2E-1289148IPR009057Homeodomain-like
PROSITE profilePS5129417.11589145IPR017930Myb domain
SuperFamilySSF466895.38E-1790146IPR009057Homeodomain-like
SMARTSM007173.3E-1093143IPR001005SANT/Myb domain
PfamPF002496.9E-1395140IPR001005SANT/Myb domain
TIGRFAMsTIGR015573.8E-1595144IPR006447Myb domain, plants
CDDcd001671.07E-996141No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MEPEESNWTW IEDKVFENSL LEFPEGFPNR WEIIAAMLPE KSPADIERHY IALLIDVTAI  60
DAGMIDLPEY EEMEVPLRQV CQKNPKSGVQ RKGGKPWTVE EHRRFLQGLE KYGKGDWKSI  120
SRYALKTRNP TQVASHAQKY FEHQQKEEAN KKRRSIFYSS IPE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678458595
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095585.19e-73transcription factor DIVARICATA-like
TrEMBLA0A022QHS11e-65A0A022QHS1_ERYGU; Uncharacterized protein
STRINGMigut.M01627.1.p2e-66(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1498869
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.12e-44MYB family protein