PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678459596

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

VOZ

Protein Properties

Length: 515aa MW: 58208 Da PI: 6.437

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678459596	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	396.4	6.7e-122	242	461	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfd 97 ppp aflgpkcalwdc+rpa +w q dycs +ha lal eg pg p++rp+gi+lkd+ll+ al ak+ gk+vgipecegaatakspwna+elfd 678459596 242 PPPVAFLGPKCALWDCPRPALCLDWSQksdDYCSVYHARLALSEGYPGRPPIIRPGGIGLKDNLLLVALDAKALGKNVGIPECEGAATAKSPWNAPELFD 341 89******************999764559***************************************************************** PP VOZ 98 lsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksak 197 +++l+ etirewlffdkprrafesgnrkqrslpdy+grgwhesrkqv++++gglkrsyymdpqp+++fewhlyeyein +d++alyrle+k +d+kks+k 678459596 342 ITVLDHETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVVNDYGGLKRSYYMDPQPLENFEWHLYEYEINRYDSCALYRLEVKRADGKKSPK 441 ************************************************************************************************ PP VOZ 198 gkvskdsladlqkklgrlta 217 gk+s+d++adlq+++ +l+a 678459596 442 GKLSHDTVADLQNQMRKLAA 461 ***************986 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence Send to blast
MNLLLLLLYA FSSRPQRLLS EMLRIWKFWH YRWLICFYLM GKASRNGACK STSHQLLKNR 60 ARTRLDDLQG MFMNLQYARK ESCNVDMALL EEQVNLLLRE WQAELNEPSP ASSLPQEGSL 120 GFSSDVCRLL QLCEEEDDAT SGLVPPKPDP DAERVVCRYE PLEAINVPDC AQEMGFKFSD 180 DVKSTNDGFS SMGVGDLSSE TLDYSSFEFY PGYGTHCIPG FDGSFYGVDG GMPHMGYRDI 240 CPPPVAFLGP KCALWDCPRP ALCLDWSQKS DDYCSVYHAR LALSEGYPGR PPIIRPGGIG 300 LKDNLLLVAL DAKALGKNVG IPECEGAATA KSPWNAPELF DITVLDHETI REWLFFDKPR 360 RAFESGNRKQ RSLPDYNGRG WHESRKQVVN DYGGLKRSYY MDPQPLENFE WHLYEYEINR 420 YDSCALYRLE VKRADGKKSP KGKLSHDTVA DLQNQMRKLA AEFPNDKPRT GKGRAKTSVR 480 SSHGSISTLA FKGFDHVSGT PPYLVDKISE CYNIT

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence Send to blast

MNLLLLLLYA FSSRPQRLLS EMLRIWKFWH YRWLICFYLM GKASRNGACK STSHQLLKNR  60
ARTRLDDLQG MFMNLQYARK ESCNVDMALL EEQVNLLLRE WQAELNEPSP ASSLPQEGSL  120
GFSSDVCRLL QLCEEEDDAT SGLVPPKPDP DAERVVCRYE PLEAINVPDC AQEMGFKFSD  180
DVKSTNDGFS SMGVGDLSSE TLDYSSFEFY PGYGTHCIPG FDGSFYGVDG GMPHMGYRDI  240
CPPPVAFLGP KCALWDCPRP ALCLDWSQKS DDYCSVYHAR LALSEGYPGR PPIIRPGGIG  300
LKDNLLLVAL DAKALGKNVG IPECEGAATA KSPWNAPELF DITVLDHETI REWLFFDKPR  360
RAFESGNRKQ RSLPDYNGRG WHESRKQVVN DYGGLKRSYY MDPQPLENFE WHLYEYEINR  420
YDSCALYRLE VKRADGKKSP KGKLSHDTVA DLQNQMRKLA AEFPNDKPRT GKGRAKTSVR  480
SSHGSISTLA FKGFDHVSGT PPYLVDKISE CYNIT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678459596

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096373.2	0.0	transcription factor VOZ1, partial
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2G9GL79	0.0	A0A2G9GL79_9LAMI; Uncharacterized protein
STRING	Migut.M01093.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-175	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]