PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678460368
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family CAMTA
Protein Properties Length: 105aa    MW: 12511.8 Da    PI: 11.2281
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678460368genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-175.95.4e-248533681
       CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevl 81
                gsl+L++rk+vryfr+DG++w+kkkdgktv+E+he+LKv+ ++ l
  678460368  8 GGSLFLFDRKVVRYFRNDGHNWRKKKDGKTVKEAHERLKVDIIQHL 53
               69***************************************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143729.596198IPR005559CG-1 DNA-binding domain
SMARTSM010768.1E-6270IPR005559CG-1 DNA-binding domain
PfamPF038598.8E-18853IPR005559CG-1 DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
MIYVHLLGGS LFLFDRKVVR YFRNDGHNWR KKKDGKTVKE AHERLKVDII QHLLRDRTAR  60
HVYRILTRMP SFRLEVWMFC TATMLMERSR KIFAGVATGC LKSTN
Cis-element ? help Back to Top
SourceLink
PlantRegMap678460368
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012437208.15e-20PREDICTED: calmodulin-binding transcription activator 3 isoform X2
RefseqXP_012437209.15e-20PREDICTED: calmodulin-binding transcription activator 3 isoform X2
RefseqXP_012437210.15e-20PREDICTED: calmodulin-binding transcription activator 3 isoform X2
RefseqXP_012437211.15e-20PREDICTED: calmodulin-binding transcription activator 3 isoform X2
RefseqXP_016738097.15e-20PREDICTED: calmodulin-binding transcription activator 3-like isoform X2
RefseqXP_016738099.15e-20PREDICTED: calmodulin-binding transcription activator 3-like isoform X2
RefseqXP_016738100.15e-20PREDICTED: calmodulin-binding transcription activator 3-like isoform X2
TrEMBLA0A438KPN75e-26A0A438KPN7_VITVI; Calmodulin-binding transcription activator 3
STRINGXP_002519355.12e-24(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39322037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.27e-22Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains