PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678460535
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 204aa    MW: 22878.8 Da    PI: 7.1955
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678460535genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP83.94e-261288482
        TCP  4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssa 82
               k+ rh ki T +g++dRRvRlsa +a+++++Lqd+LG+d++ k+++WL+ +a  +i  l+ ++  ++ +c +  +    +
  678460535 12 KRNRHTKIQTPKGMKDRRVRLSAYTAIQLYELQDRLGYDQPTKAVDWLISKARSEIARLNHSPPAAEFDCgS-RE--LGQ 88
               899***********************************************************7777777732.22..222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.6E-251283IPR005333Transcription factor, TCP
PROSITE profilePS5136923.0141270IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MDADTEPEMR RKRNRHTKIQ TPKGMKDRRV RLSAYTAIQL YELQDRLGYD QPTKAVDWLI  60
SKARSEIARL NHSPPAAEFD CGSRELGQGA ATGSSFMNLT MNPLIPPPAE SLQSQNLALS  120
LYAARVQGNG FLVNHPMDTT CYPPPEHSSA HREMMMVMMD GTALEAHPWV PAPADHVGLQ  180
PWRCGGFRYP SQIYGGDKEE DNRN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zkt_A1e-171770154Putative transcription factor PCF6
5zkt_B1e-171770154Putative transcription factor PCF6
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678460535
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022947877.17e-25transcription factor TCP3-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41122145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.11e-22TCP domain protein 10