PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678460914
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 240aa    MW: 26651.7 Da    PI: 5.0909
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678460914genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.4e-3070128259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++v itY+ eHnh+
  678460914  70 QDPWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRHDPTAVMITYTCEHNHP 128
                799************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-3261128IPR003657WRKY domain
SuperFamilySSF1182901.57E-2663129IPR003657WRKY domain
PROSITE profilePS5081131.62864130IPR003657WRKY domain
SMARTSM007746.1E-3569129IPR003657WRKY domain
PfamPF031065.9E-2571128IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MERRVDRGPE DEDPSSATTT PENTAGSPLS GDEEIHAPSV KKSRKGTKKR VVTVSLGDGL  60
RSKTEVQPPQ DPWSWRKYGQ KPIKGSPYPR GYYRCSSSKG CPARKQVERS RHDPTAVMIT  120
YTCEHNHPLS TPAVKPHHLT RPLAPPMPEP GESGLDQGEE ETAAAEEGFA EFVGEFGWVC  180
EVGSTMMDET TFVGPSWVNA DVERFMPIGE EDKLLFGDLG DLPEYSLVFR RCVEETTFPR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-1959129776Probable WRKY transcription factor 4
2lex_A5e-1959129776Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678460914
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083309.11e-100probable WRKY transcription factor 69
TrEMBLA0A2G9HZX03e-99A0A2G9HZX0_9LAMI; Uncharacterized protein
STRINGMigut.M00241.1.p4e-91(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74682232
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.11e-53WRKY DNA-binding protein 69