PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678462370
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB
Protein Properties Length: 168aa    MW: 19669.1 Da    PI: 8.0699
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678462370genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.13.5e-07750344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT  Ed+ + ++  ++  g   +W++Ia+++  ++++ ++  ++
        678462370  7 NWTWNEDKVFENCLLEFEEGcpnRWESIAERLR-TKSPAEVERHY 50
                     8********************************.**********9 PP
2Myb_DNA-binding51.52.2e-16100145247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+ +++++ +++G+g+Wk+I+r+  ++R + q+ s+ qk+
        678462370 100 KPWTEEEHRRFLQGLEKYGKGDWKSISRYAVQTRNPTQVASHAQKH 145
                      58******************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512937.12358IPR017884SANT domain
SMARTSM007172.2E-4456IPR001005SANT/Myb domain
SuperFamilySSF466892.9E-10661IPR009057Homeodomain-like
PfamPF002494.2E-6751IPR001005SANT/Myb domain
CDDcd001673.09E-4754No hitNo description
Gene3DG3DSA:1.10.10.605.4E-5854IPR009057Homeodomain-like
PROSITE profilePS5129419.0794150IPR017930Myb domain
SuperFamilySSF466892.76E-1795151IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-1295153IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-1598149IPR006447Myb domain, plants
SMARTSM007171.0E-1198148IPR001005SANT/Myb domain
PfamPF002492.7E-13100145IPR001005SANT/Myb domain
CDDcd001677.93E-10101146No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MEPGEPNWTW NEDKVFENCL LEFEEGCPNR WESIAERLRT KSPAEVERHY AALLSDVTAI  60
DAGLIDLPKY QEREVPVPQA RQKNPKSDKK PAVVQRKVGK PWTEEEHRRF LQGLEKYGKG  120
DWKSISRYAV QTRNPTQVAS HAQKHFERQE KEEANKKRRS IFDCPIPE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678462370
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095585.19e-81transcription factor DIVARICATA-like
TrEMBLS8DRM73e-79S8DRM7_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.M01627.1.p1e-70(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1498869
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.12e-47MYB family protein