PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678463310
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family GeBP
Protein Properties Length: 107aa    MW: 12451.1 Da    PI: 6.9701
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678463310genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57368.21.7e-2145101156
     DUF573   1 klfqrlwseeDeivlLqGlidfkaktgk.spsddidafyefvkksisfkvsksqlve 56 
                klfqrlw++eDei lLqG+id+++++g+ +++ d+  fy+++k +++f++sk+qlv+
  678463310  45 KLFQRLWTDEDEIELLQGFIDYTTRRGSsQQYPDTATFYDQIKTKLQFDFSKNQLVQ 101
                589************************966677**********************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.9E-1747101IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MKRTILPPPQ LPHSVSQVTI AVPDPHLQQH IPESKRPVPP DESRKLFQRL WTDEDEIELL  60
QGFIDYTTRR GSSQQYPDTA TFYDQIKTKL QFDFSKNQLV QLPSALH
Cis-element ? help Back to Top
SourceLink
PlantRegMap678463310
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837927.13e-33PREDICTED: uncharacterized protein LOC105958472
SwissprotQ9CAV75e-25STKLJ_ARATH; Probable transcription factor At3g04930
TrEMBLA0A2G9GWT91e-33A0A2G9GWT9_9LAMI; Uncharacterized protein
STRINGMigut.N01942.1.p1e-32(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40522445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.21e-27DNA-binding storekeeper protein-related transcriptional regulator