PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678463653
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family GRAS
Protein Properties Length: 138aa    MW: 15651.5 Da    PI: 8.0112
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678463653genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS49.76.7e-1680132355
       GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar 55 
                 lL++cA+ v+++d++ a+ lL+r+++++s++gd+++Rla+ ft AL+arla+
  678463653  80 GLLIQCAQIVANHDFRTANDLLTRIRQHSSSHGDSTERLAHSFTTALEARLAG 132
                68*************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098512.1652138IPR005202Transcription factor GRAS
PfamPF035142.3E-1380132IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MINPSREESD SVRLDRFSEN MMNCDFESEP IEMYYNVPLC GKTDGDSCEN SKKSWRGHNR  60
GRRKGSKKHG ITREFVDLSG LLIQCAQIVA NHDFRTANDL LTRIRQHSSS HGDSTERLAH  120
SFTTALEARL AGTGILRH
Cis-element ? help Back to Top
SourceLink
PlantRegMap678463653
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089500.17e-39scarecrow-like protein 30
TrEMBLA0A2G9I6F42e-30A0A2G9I6F4_9LAMI; Uncharacterized protein
STRINGXP_009612535.11e-26(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1713644
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.13e-22GRAS family protein