PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678464620
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 207aa    MW: 23546.2 Da    PI: 9.0415
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678464620genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-1677125354
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                + GVr++k +g+++AeIrdp     + kr++lg+f taeeAa+a++a ++ +e
  678464620  77 FVGVRRRK-WGKFAAEIRDPLR---KgKRVWLGTFATAEEAAEAYVAKKLDIE 125
                78***998.**********732...24*******************9987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.6E-1576131IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-2176126IPR001471AP2/ERF domain
PROSITE profilePS5103218.24176134IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-1677128IPR016177DNA-binding domain
PfamPF008476.3E-1177125IPR001471AP2/ERF domain
PRINTSPR003671.7E-87788IPR001471AP2/ERF domain
PRINTSPR003671.7E-8100116IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MDDLKLKFYS ATRIRVSYSD PYATDSSSDE SETNSKRKVH EIVLRRAPAR VARKKGESGD  60
FRDLKDLRWR EEGNRSFVGV RRRKWGKFAA EIRDPLRKGK RVWLGTFATA EEAAEAYVAK  120
KLDIEEKLRA KNCSDMNQKS PSSVFETESW ESSHDSGCRS DKVSEDKDGD VVNGNGLFMM  180
GDFSRLNDLS IIAAAEYEAI SNSRSRE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-1374117346ATERF1
3gcc_A1e-1374117346ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678464620
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070807.14e-44ethylene-responsive transcription factor ERF069
TrEMBLA0A2G9GIW95e-41A0A2G9GIW9_9LAMI; Uncharacterized protein
STRINGMigut.E00336.1.p3e-33(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61590.16e-13ERF family protein