PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678465288
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 118aa    MW: 13090.6 Da    PI: 8.6879
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678465288genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.8e-20859155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++y+GVr  +++g+++AeIrd +++g  +r++lg+++tae+Aa+a+++a+++++g
  678465288  8 TKYRGVRP-RSWGKYAAEIRD-TDRG-GARVWLGTYDTAEDAARAYDRAALAMRG 59
               69****95.55**********.4544.5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.30E-18868No hitNo description
PfamPF008479.2E-14859IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-30968IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-23969IPR016177DNA-binding domain
PROSITE profilePS5103222.708967IPR001471AP2/ERF domain
SMARTSM003802.4E-33973IPR001471AP2/ERF domain
PRINTSPR003671.3E-101021IPR001471AP2/ERF domain
PRINTSPR003671.3E-103349IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MEKGKGETKY RGVRPRSWGK YAAEIRDTDR GGARVWLGTY DTAEDAARAY DRAALAMRGQ  60
YAVLNFPHEH GLPGGGSTSG GGRRSICQQE VIEFECVDDS ILEQLLDDEV KRRAKKKG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-31910114114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678465288
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003546399.12e-38ethylene-responsive transcription factor ERF098
RefseqXP_028203151.12e-38ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC56e-32ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2G9I9T03e-38A0A2G9I9T0_9LAMI; Uncharacterized protein
STRINGGLYMA15G17090.17e-38(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.13e-23Ethylene-responsive element binding factor 14
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]