PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678466323
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NF-YB
Protein Properties Length: 144aa    MW: 15623 Da    PI: 9.2869
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678466323genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB30.96.3e-101277197
      NF-YB 71 latlGfedyveplkvylkkyrelegek 97
               ++tlGfe+yveplkvyl+++r++egek
  678466323  1 MTTLGFEEYVEPLKVYLQRFRDIEGEK 27
               89***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.101.7E-6138IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MTTLGFEEYV EPLKVYLQRF RDIEGEKSAM VGRGDKDAAG GSSASVGGDE GNMYVMGHHQ  60
GGSIYGYGVG GSGYGSGTRP VNFGRLKSYV LTTPEILFLL GRLKPISDPH PLRATGTFSL  120
VFMMKKWKAI VDMQNNPFIP LALL
Cis-element ? help Back to Top
SourceLink
PlantRegMap678466323
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021978207.14e-19nuclear transcription factor Y subunit B-3-like
TrEMBLA0A251U9899e-18A0A251U989_HELAN; Putative histone-fold protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47640.16e-12nuclear factor Y, subunit B2