PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678466407
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family LFY
Protein Properties Length: 433aa    MW: 48995.5 Da    PI: 7.3039
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678466407genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY649.16.2e-198364141386
    FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrld 100
                mdp+afs++lfkwdpr+   + ++rlle  + + ap ++a ++  r+l +leelf+ayG+ry+t+akiaelGftv+tL+dm+deeld++m+sl++ifr+d
  678466407  36 MDPDAFSSNLFKWDPRTGL-PGTNRLLEPVVPMVAPPQVAYSIRPRELGGLEELFQAYGIRYFTAAKIAELGFTVNTLLDMRDEELDEMMNSLCQIFRWD 134
                9**************9876.778999999888888878899999999***************************************************** PP

    FLO_LFY 101 llvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkke 200
                llvGeryGikaavraerrrl+eee  ++rr+lls d+ +aldalsqeglseepvq+ekeaagsg +g   +e++a+++ ++++  ++++++k+ + ++++
  678466407 135 LLVGERYGIKAAVRAERRRLDEEE--ARRRHLLSGDTIHALDALSQEGLSEEPVQQEKEAAGSGSGG--MWEMMAVPSGSRKH--QQQQRRKNYKGRSRM 228
                **********************87..99999********************************9988..89999998543322..233233455555555 PP

    FLO_LFY 201 lkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkP 300
                ++ e+d+d+++e++  +++ + +g erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq++akerGekcPtkvtnqvfryakkaga+yinkP
  678466407 229 ASVEDDDDNDDETEGADDDDNCGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNLAKERGEKCPTKVTNQVFRYAKKAGANYINKP 328
                5556677777777777788888999*************************************************************************** PP

    FLO_LFY 301 kmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
                kmrhYvhCYalhcLde++s+alrrafkergenvGawrqacykplvaiaa qgwdida+fnahprL+iWYvPtkLrqLCh+ers+a+
  678466407 329 KMRHYVHCYALHCLDEDTSDALRRAFKERGENVGAWRQACYKPLVAIAAPQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERSAAA 414
                **********************************************************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF016984.5E-20436413IPR002910Floricaula/leafy protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010582Biological Processfloral meristem determinacy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0031490Molecular Functionchromatin DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MLTSFKCRTL TQHQPYSSKC QNKQLLTLCA IVRKQMDPDA FSSNLFKWDP RTGLPGTNRL  60
LEPVVPMVAP PQVAYSIRPR ELGGLEELFQ AYGIRYFTAA KIAELGFTVN TLLDMRDEEL  120
DEMMNSLCQI FRWDLLVGER YGIKAAVRAE RRRLDEEEAR RRHLLSGDTI HALDALSQEG  180
LSEEPVQQEK EAAGSGSGGM WEMMAVPSGS RKHQQQQRRK NYKGRSRMAS VEDDDDNDDE  240
TEGADDDDNC GGCERQREHP FIVTEPGEVA RGKKNGLDYL FHLYEQCREF LIQVQNLAKE  300
RGEKCPTKVT NQVFRYAKKA GANYINKPKM RHYVHCYALH CLDEDTSDAL RRAFKERGEN  360
VGAWRQACYK PLVAIAAPQG WDIDAIFNAH PRLAIWYVPT KLRQLCHAER SAAAAAAASA  420
ASSVTGVAHM HPF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2vy1_A1e-1052524112161PROTEIN LEAFY
2vy2_A1e-1052524112161PROTEIN LEAFY
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtRequired for flower development. FLO may interact in a sequential manner with other homeotic genes affecting floral organ identity.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00095SELEXTransfer from AT5G61850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678466407
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856831.10.0PREDICTED: floricaula protein-like
SwissprotP239150.0FLO_ANTMA; Floricaula protein
TrEMBLA0A2G9GA060.0A0A2G9GA06_9LAMI; Uncharacterized protein
STRINGMigut.I00669.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66682333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-150floral meristem identity control protein LEAFY (LFY)
Publications ? help Back to Top
  1. Coen ES, et al.
    floricaula: a homeotic gene required for flower development in antirrhinum majus.
    Cell, 1990. 63(6): p. 1311-22
    [PMID:1702033]