PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678470291

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

G2-like

Protein Properties

Length: 249aa MW: 27256.5 Da PI: 6.5077

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678470291	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	110.1	1.1e-34	188	242	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe Fveav++LGGsekAtPk +l+lm+v+gLt++hvkSHLQkYR+ 678470291 188 KQRMRWTPELHETFVEAVNKLGGSEKATPKGVLKLMNVDGLTIYHVKSHLQKYRT 242 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.5E-32	185	243	IPR009057	Homeodomain-like
PROSITE profile	PS51294	13.742	185	245	IPR017930	Myb domain
SuperFamily	SSF46689	8.78E-19	187	242	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.2E-26	188	242	IPR006447	Myb domain, plants
Pfam	PF00249	3.3E-11	190	241	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence Send to blast
METKPVGHIF SSCAGFSTDL HTSSIRRPEK HLRKTPLISQ SKGVGESIAL AQCAHPSILQ 60 SKCGGEHDDS WSTDRFPDFP VSHSLQSNSP DAGCSDEMAV AFEDLSKSSE WQEWADQLIT 120 DDDALAADWS GLLVDVKAPS LEPPEEAPKQ QVKILIQQTR VSQQLPGTHG ETCSKNGQSS 180 SPAGASPKQR MRWTPELHET FVEAVNKLGG SEKATPKGVL KLMNVDGLTI YHVKSHLQKY 240 RTARIRSET

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-30	188	246	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-30	188	246	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-30	188	246	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-30	188	246	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-30	188	246	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-30	188	246	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-30	188	246	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-30	188	246	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678470291

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012830829.1	1e-88	PREDICTED: protein PHR1-LIKE 1-like isoform X1
TrEMBL	A0A022S254	2e-87	A0A022S254_ERYGU; Uncharacterized protein
STRING	Migut.D00466.1.p	4e-88	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2753	23	49

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	3e-48	phosphate starvation response 1