PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678470896
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 158aa    MW: 18548 Da    PI: 5.0535
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678470896genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.2e-056586323
               ETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2  3 CpdCgksFsrksnLkrHirt.H 23
               C+ Cg +F+r+ nLkrH  + H
  678470896 65 CSLCGIHFTRNWNLKRHNDKfH 86
               *****************87777 PP
2zf-C2H2130.00032128151123
                EEETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                ++C++Cg + ++  +L  H++  H
  678470896 128 FSCTYCGDRSTTLGQLFWHLQEnH 151
                89******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003557.16386IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.66391IPR007087Zinc finger, C2H2
PROSITE patternPS0002806586IPR007087Zinc finger, C2H2
SMARTSM003552890112IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028092113IPR007087Zinc finger, C2H2
SMARTSM003550.1128151IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
DDEEIYEVLG DLFLDDEPEG TADENSRADV EQHEVDRNLE NSVVDTQGGN REQVNNSQED  60
NRPMCSLCGI HFTRNWNLKR HNDKFHRKSN NCLICKKPYH FVDNLIHHVH VHHKDAHDEF  120
QPNQDNSFSC TYCGDRSTTL GQLFWHLQEN HEVQNHLT
Cis-element ? help Back to Top
SourceLink
PlantRegMap678470896