PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 80869
Common NameBLH1-1, SELMODRAFT_80869
Organism
Selaginella moellendorffii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
Family TALE
Protein Properties Length: 293aa    MW: 32383.5 Da    PI: 10.1723
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
80869genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.11.3e-072592921950
               HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHH CS
  Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqN 50 
               Fe   ++yp+ +++  LA+++gLt  qV++WF N
     80869 259 FEHflHPYPKDADKMMLARQTGLTRGQVSNWFIN 292
               664559**************************98 PP
2BELL121.14.9e-39120191172
   BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
            erqe + kk+kLl +l+eVd+rY+qy++q+q+vi sF+avag g+a+pYt+lAl+a+Sr FrcL+dai++qi
  80869 120 ERQEYEGKKTKLLAMLQEVDRRYRQYYDQMQVVITSFDAVAGAGAATPYTALALQAMSRYFRCLRDAITGQI 191
            799********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.8E-5560189IPR006563POX domain
PfamPF075265.7E-4866188IPR006563POX domain
SuperFamilySSF466895.56E-13233293IPR009057Homeodomain-like
PROSITE profilePS5007110.527237293IPR001356Homeobox domain
CDDcd000862.59E-9240293No hitNo description
Gene3DG3DSA:1.10.10.601.5E-21243293IPR009057Homeodomain-like
PfamPF059201.3E-15257293IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MNSPGGSQDA KRGVGKLSGD LSHFRTSPRD GGASYVNLPS SAGTKHSYFD VAGPGPSAVS  60
NSFSFVSGSR YLRAAQQLLD EVCSVGRGLK QSSKSKGSQQ GLGGQSSPAA ENVSVLTPDE  120
RQEYEGKKTK LLAMLQEVDR RYRQYYDQMQ VVITSFDAVA GAGAATPYTA LALQAMSRYF  180
RCLRDAITGQ IQTTCKALGE EDVTKSITSR PLTSRLRFID QQIRQQRAYQ QYGMLQQHAW  240
RPQRGLPERS VSILRAWLFE HFLHPYPKDA DKMMLARQTG LTRGQVSNWF INA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024523215.10.0BEL1-like homeodomain protein 1 isoform X2
SwissprotQ9SIW15e-88BLH7_ARATH; BEL1-like homeodomain protein 7
TrEMBLD8QYH20.0D8QYH2_SELML; Uncharacterized protein BLH1-1 (Fragment)
STRINGEFJ351990.0(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP13316172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34610.25e-81BEL1-like homeodomain 6
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Banks JA, et al.
    The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
    Science, 2011. 332(6032): p. 960-3
    [PMID:21551031]