PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 916208
Common NameARALYDRAFT_916208
Organism
Arabidopsis lyrata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family GeBP
Protein Properties Length: 325aa    MW: 36085.8 Da    PI: 6.0727
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
916208genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57332.91.7e-10184207225
  DUF573   2 lfqrlwseeDeivlLqGlidfkak 25 
             lfqrlwseeDeiv+LqG+idf+ +
  916208 184 LFQRLWSEEDEIVFLQGMIDFRRD 207
             79*******************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MAKKKQSQAL VTRSTAKKPS EVASTSKKPS EMPSPVKKPS GVTSPAKKPL DVASPAKKPL  60
EESSTTAKKK QPEPVKNLMP ESSSEEEEED SSADEEEEPS KDSGKKNPET AVVTNQSSVS  120
ESEPETKSES DTETEPTAKT PTPATAPASL NKKRQSEGEP STEEVNVSKR AKTESERETA  180
KKQLFQRLWS EEDEIVFLQG MIDFRRDIDH DKKCFELAKM IWGSDVDATL VKSKRKIKVD  240
DSLKVDGVKV ECDWFVSSFL IGSFKNLGAW IDEETLKVKW SLVPVKTRKR IEEKIKSVQA  300
NEFKLMLQKL EVLHEVSSLM AKSD*
Cis-element ? help Back to Top
SourceLink
PlantRegMap916208
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020874716.10.0probable transcription factor At4g00610
SwissprotO652705e-46STKLQ_ARATH; Probable transcription factor At4g00610
TrEMBLD7MJ890.0D7MJ89_ARALL; Uncharacterized protein
STRINGscaffold_703950.10.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM31328181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00610.13e-46DNA-binding storekeeper protein-related transcriptional regulator