PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

916384

Common Name

ARALYDRAFT_916384

Organism

Arabidopsis lyrata

Taxonomic ID

81972

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis

Family

G2-like

Protein Properties

Length: 215aa MW: 24603.5 Da PI: 5.8854

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
916384	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	25.8	2.4e-08	62	85	3	26
G2-like 3 rlrWtpeLHerFveaveqLGGsek 26 +rW+peLHe F+eav++L G+ek 916384 62 GMRWSPELHELFLEAVNKLEGPEK 85 59*******************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.4E-5	61	85	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0016021	Cellular Component	integral component of membrane
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence Send to blast
MMFNSGDVVI LAAYLEAMDS THLVFQTQKE IYQVNHGQNC VPASMSVTVE PSPGSAVNHI 60 PGMRWSPELH ELFLEAVNKL EGPEKREMLE KSSQLAIERN KRKELYNAYK KLTSKYKFVC 120 KRFGPTADSF LEDDGHWTKS EECCQVEQSI CLLNSEPPID DMIEDHDTTF VLYISVTCIL 180 LSFVNKIFPT IFFCSPFSLR LIIYMRLIIL RHLL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	916384

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	D7MJP1	1e-159	D7MJP1_ARALL; Predicted protein
STRING	scaffold_704126.1	1e-160	(Arabidopsis lyrata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.2	4e-15	G2-like family protein

Link Out ? help Back to Top
Phytozome	916384
Entrez Gene	9306860