PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA13G00046
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family BES1
Protein Properties Length: 210aa    MW: 23117.1 Da    PI: 10.6145
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA13G00046genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822176.61.2e-54171241105
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl. 98 
                 ++sgr+ptwkErEnnk+RERrRRaiaaki++GLR+q+nyklpk++DnneVlkALc+eAGw+v dDGttyrkgskp+ ++ + +ss  +sp  s+q s+ 
  AA13G00046  17 TTSGRMPTWKERENNKKRERRRRAIAAKIFSGLRSQANYKLPKHCDNNEVLKALCNEAGWIVLDDGTTYRKGSKPMVTETTPQSSVFQSPIPSYQASPt 115
                 589*************************************************************************77888888888888888884430 PP

      DUF822  99 ..kssalas 105
                   +s++++s
  AA13G00046 116 rfESNQINS 124
                 003333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.4E-4819139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005773Cellular Componentvacuole
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MTASGQGGGS TAARSATTSG RMPTWKEREN NKKRERRRRA IAAKIFSGLR SQANYKLPKH  60
CDNNEVLKAL CNEAGWIVLD DGTTYRKGSK PMVTETTPQS SVFQSPIPSY QASPTRFESN  120
QINSLLISNS APVTPPISSP RGSIPRLPTR WQISNFSVSA PSSPTRVHRY TLIPECDVAV  180
KPWEGDKIHD VGVDDLELTL GHTKGRRTIT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-2421101372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-2421101372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-2421101372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-2421101372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA13G00046
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0024525e-56BT002452.1 Arabidopsis thaliana putative protein (At3g50750) mRNA, complete cds.
GenBankBT0063105e-56BT006310.1 Arabidopsis thaliana At3g50750 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006404006.17e-77BES1/BZR1 homolog protein 1
SwissprotQ9S7F32e-74BEH1_ARATH; BES1/BZR1 homolog protein 1
TrEMBLV4LNV82e-75V4LNV8_EUTSA; Uncharacterized protein
STRINGXP_006404006.13e-76(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144671721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.19e-54BES1/BZR1 homolog 1