PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA14G00056
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family G2-like
Protein Properties Length: 107aa    MW: 12778.2 Da    PI: 7.844
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA14G00056genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.11.3e-101203655
     G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                m+vkgLt++hvkSHLQ+YR 
  AA14G00056  1 MDVKGLTISHVKSHLQMYRG 20
                9******************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.5E-9120IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MDVKGLTISH VKSHLQMYRG SKLTLTKPEL SYSSSSRRRR RQDNEEDDLH DTRNDCLLGF  60
HSFNFREQSS DNDDDDFLHI MKMERRSKTF ADISDSFKFH SHHLRFL
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA14G00056
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023632579.15e-41putative Myb family transcription factor At1g14600 isoform X2
SwissprotQ700D99e-38MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBLR0GJS67e-38R0GJS6_9BRAS; Uncharacterized protein
STRINGCagra.3501s0036.1.p1e-38(Capsella grandiflora)
STRINGXP_006303284.11e-38(Capsella rubella)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46941852
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.12e-39G2-like family protein