PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA14G00057
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family G2-like
Protein Properties Length: 48aa    MW: 5368.06 Da    PI: 10.1208
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA14G00057genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.81e-122446224
     G2-like  2 prlrWtpeLHerFveaveqLGGs 24
                prlrWtpeLH++Fv+ave LGG+
  AA14G00057 24 PRLRWTPELHRSFVHAVELLGGQ 46
                8*********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-102046IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 48 aa     Download sequence    Send to blast
MGRCGRSNDE GSGGVRPYVR SPVPRLRWTP ELHRSFVHAV ELLGGQYS
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA14G00057
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0106579e-39AC010657.3 Genomic sequence for Arabidopsis thaliana BAC T5E21 from chromosome I, complete sequence.
GenBankCP0026849e-39CP002684.1 Arabidopsis thaliana chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_172912.31e-24Homeodomain-like superfamily protein
SwissprotQ700D91e-25MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBLA0A087HNK09e-24A0A087HNK0_ARAAL; Uncharacterized protein
TrEMBLA0A087HNK19e-24A0A087HNK1_ARAAL; Uncharacterized protein
STRINGA0A087HNK02e-24(Arabis alpina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.15e-28G2-like family protein